Focus on:
All days
30 Jan 2023
31 Jan 2023
1 Feb 2023
2 Feb 2023
All sessions
REGISTRATION
Session I
Session VI
Hide Contributions
Indico style
Indico style - inline minutes
Indico style - numbered
Indico style - numbered + minutes
Indico Weeks View
Back to Conference View
Choose Timezone
Use the event/category timezone
Specify a timezone
Africa/Abidjan
Africa/Accra
Africa/Addis_Ababa
Africa/Algiers
Africa/Asmara
Africa/Bamako
Africa/Bangui
Africa/Banjul
Africa/Bissau
Africa/Blantyre
Africa/Brazzaville
Africa/Bujumbura
Africa/Cairo
Africa/Casablanca
Africa/Ceuta
Africa/Conakry
Africa/Dakar
Africa/Dar_es_Salaam
Africa/Djibouti
Africa/Douala
Africa/El_Aaiun
Africa/Freetown
Africa/Gaborone
Africa/Harare
Africa/Johannesburg
Africa/Juba
Africa/Kampala
Africa/Khartoum
Africa/Kigali
Africa/Kinshasa
Africa/Lagos
Africa/Libreville
Africa/Lome
Africa/Luanda
Africa/Lubumbashi
Africa/Lusaka
Africa/Malabo
Africa/Maputo
Africa/Maseru
Africa/Mbabane
Africa/Mogadishu
Africa/Monrovia
Africa/Nairobi
Africa/Ndjamena
Africa/Niamey
Africa/Nouakchott
Africa/Ouagadougou
Africa/Porto-Novo
Africa/Sao_Tome
Africa/Tripoli
Africa/Tunis
Africa/Windhoek
America/Adak
America/Anchorage
America/Anguilla
America/Antigua
America/Araguaina
America/Argentina/Buenos_Aires
America/Argentina/Catamarca
America/Argentina/Cordoba
America/Argentina/Jujuy
America/Argentina/La_Rioja
America/Argentina/Mendoza
America/Argentina/Rio_Gallegos
America/Argentina/Salta
America/Argentina/San_Juan
America/Argentina/San_Luis
America/Argentina/Tucuman
America/Argentina/Ushuaia
America/Aruba
America/Asuncion
America/Atikokan
America/Bahia
America/Bahia_Banderas
America/Barbados
America/Belem
America/Belize
America/Blanc-Sablon
America/Boa_Vista
America/Bogota
America/Boise
America/Cambridge_Bay
America/Campo_Grande
America/Cancun
America/Caracas
America/Cayenne
America/Cayman
America/Chicago
America/Chihuahua
America/Ciudad_Juarez
America/Costa_Rica
America/Creston
America/Cuiaba
America/Curacao
America/Danmarkshavn
America/Dawson
America/Dawson_Creek
America/Denver
America/Detroit
America/Dominica
America/Edmonton
America/Eirunepe
America/El_Salvador
America/Fort_Nelson
America/Fortaleza
America/Glace_Bay
America/Goose_Bay
America/Grand_Turk
America/Grenada
America/Guadeloupe
America/Guatemala
America/Guayaquil
America/Guyana
America/Halifax
America/Havana
America/Hermosillo
America/Indiana/Indianapolis
America/Indiana/Knox
America/Indiana/Marengo
America/Indiana/Petersburg
America/Indiana/Tell_City
America/Indiana/Vevay
America/Indiana/Vincennes
America/Indiana/Winamac
America/Inuvik
America/Iqaluit
America/Jamaica
America/Juneau
America/Kentucky/Louisville
America/Kentucky/Monticello
America/Kralendijk
America/La_Paz
America/Lima
America/Los_Angeles
America/Lower_Princes
America/Maceio
America/Managua
America/Manaus
America/Marigot
America/Martinique
America/Matamoros
America/Mazatlan
America/Menominee
America/Merida
America/Metlakatla
America/Mexico_City
America/Miquelon
America/Moncton
America/Monterrey
America/Montevideo
America/Montserrat
America/Nassau
America/New_York
America/Nome
America/Noronha
America/North_Dakota/Beulah
America/North_Dakota/Center
America/North_Dakota/New_Salem
America/Nuuk
America/Ojinaga
America/Panama
America/Paramaribo
America/Phoenix
America/Port-au-Prince
America/Port_of_Spain
America/Porto_Velho
America/Puerto_Rico
America/Punta_Arenas
America/Rankin_Inlet
America/Recife
America/Regina
America/Resolute
America/Rio_Branco
America/Santarem
America/Santiago
America/Santo_Domingo
America/Sao_Paulo
America/Scoresbysund
America/Sitka
America/St_Barthelemy
America/St_Johns
America/St_Kitts
America/St_Lucia
America/St_Thomas
America/St_Vincent
America/Swift_Current
America/Tegucigalpa
America/Thule
America/Tijuana
America/Toronto
America/Tortola
America/Vancouver
America/Whitehorse
America/Winnipeg
America/Yakutat
Antarctica/Casey
Antarctica/Davis
Antarctica/DumontDUrville
Antarctica/Macquarie
Antarctica/Mawson
Antarctica/McMurdo
Antarctica/Palmer
Antarctica/Rothera
Antarctica/Syowa
Antarctica/Troll
Antarctica/Vostok
Arctic/Longyearbyen
Asia/Aden
Asia/Almaty
Asia/Amman
Asia/Anadyr
Asia/Aqtau
Asia/Aqtobe
Asia/Ashgabat
Asia/Atyrau
Asia/Baghdad
Asia/Bahrain
Asia/Baku
Asia/Bangkok
Asia/Barnaul
Asia/Beirut
Asia/Bishkek
Asia/Brunei
Asia/Chita
Asia/Choibalsan
Asia/Colombo
Asia/Damascus
Asia/Dhaka
Asia/Dili
Asia/Dubai
Asia/Dushanbe
Asia/Famagusta
Asia/Gaza
Asia/Hebron
Asia/Ho_Chi_Minh
Asia/Hong_Kong
Asia/Hovd
Asia/Irkutsk
Asia/Jakarta
Asia/Jayapura
Asia/Jerusalem
Asia/Kabul
Asia/Kamchatka
Asia/Karachi
Asia/Kathmandu
Asia/Khandyga
Asia/Kolkata
Asia/Krasnoyarsk
Asia/Kuala_Lumpur
Asia/Kuching
Asia/Kuwait
Asia/Macau
Asia/Magadan
Asia/Makassar
Asia/Manila
Asia/Muscat
Asia/Nicosia
Asia/Novokuznetsk
Asia/Novosibirsk
Asia/Omsk
Asia/Oral
Asia/Phnom_Penh
Asia/Pontianak
Asia/Pyongyang
Asia/Qatar
Asia/Qostanay
Asia/Qyzylorda
Asia/Riyadh
Asia/Sakhalin
Asia/Samarkand
Asia/Seoul
Asia/Shanghai
Asia/Singapore
Asia/Srednekolymsk
Asia/Taipei
Asia/Tashkent
Asia/Tbilisi
Asia/Tehran
Asia/Thimphu
Asia/Tokyo
Asia/Tomsk
Asia/Ulaanbaatar
Asia/Urumqi
Asia/Ust-Nera
Asia/Vientiane
Asia/Vladivostok
Asia/Yakutsk
Asia/Yangon
Asia/Yekaterinburg
Asia/Yerevan
Atlantic/Azores
Atlantic/Bermuda
Atlantic/Canary
Atlantic/Cape_Verde
Atlantic/Faroe
Atlantic/Madeira
Atlantic/Reykjavik
Atlantic/South_Georgia
Atlantic/St_Helena
Atlantic/Stanley
Australia/Adelaide
Australia/Brisbane
Australia/Broken_Hill
Australia/Darwin
Australia/Eucla
Australia/Hobart
Australia/Lindeman
Australia/Lord_Howe
Australia/Melbourne
Australia/Perth
Australia/Sydney
Canada/Atlantic
Canada/Central
Canada/Eastern
Canada/Mountain
Canada/Newfoundland
Canada/Pacific
Europe/Amsterdam
Europe/Andorra
Europe/Astrakhan
Europe/Athens
Europe/Belgrade
Europe/Berlin
Europe/Bratislava
Europe/Brussels
Europe/Bucharest
Europe/Budapest
Europe/Busingen
Europe/Chisinau
Europe/Copenhagen
Europe/Dublin
Europe/Gibraltar
Europe/Guernsey
Europe/Helsinki
Europe/Isle_of_Man
Europe/Istanbul
Europe/Jersey
Europe/Kaliningrad
Europe/Kirov
Europe/Kyiv
Europe/Lisbon
Europe/Ljubljana
Europe/London
Europe/Luxembourg
Europe/Madrid
Europe/Malta
Europe/Mariehamn
Europe/Minsk
Europe/Monaco
Europe/Moscow
Europe/Oslo
Europe/Paris
Europe/Podgorica
Europe/Prague
Europe/Riga
Europe/Rome
Europe/Samara
Europe/San_Marino
Europe/Sarajevo
Europe/Saratov
Europe/Simferopol
Europe/Skopje
Europe/Sofia
Europe/Stockholm
Europe/Tallinn
Europe/Tirane
Europe/Ulyanovsk
Europe/Vaduz
Europe/Vatican
Europe/Vienna
Europe/Vilnius
Europe/Volgograd
Europe/Warsaw
Europe/Zagreb
Europe/Zurich
GMT
Indian/Antananarivo
Indian/Chagos
Indian/Christmas
Indian/Cocos
Indian/Comoro
Indian/Kerguelen
Indian/Mahe
Indian/Maldives
Indian/Mauritius
Indian/Mayotte
Indian/Reunion
Pacific/Apia
Pacific/Auckland
Pacific/Bougainville
Pacific/Chatham
Pacific/Chuuk
Pacific/Easter
Pacific/Efate
Pacific/Fakaofo
Pacific/Fiji
Pacific/Funafuti
Pacific/Galapagos
Pacific/Gambier
Pacific/Guadalcanal
Pacific/Guam
Pacific/Honolulu
Pacific/Kanton
Pacific/Kiritimati
Pacific/Kosrae
Pacific/Kwajalein
Pacific/Majuro
Pacific/Marquesas
Pacific/Midway
Pacific/Nauru
Pacific/Niue
Pacific/Norfolk
Pacific/Noumea
Pacific/Pago_Pago
Pacific/Palau
Pacific/Pitcairn
Pacific/Pohnpei
Pacific/Port_Moresby
Pacific/Rarotonga
Pacific/Saipan
Pacific/Tahiti
Pacific/Tarawa
Pacific/Tongatapu
Pacific/Wake
Pacific/Wallis
US/Alaska
US/Arizona
US/Central
US/Eastern
US/Hawaii
US/Mountain
US/Pacific
UTC
Save
Europe/Rome
English (United Kingdom)
Deutsch (Deutschland)
English (United Kingdom)
English (United States)
Español (España)
Français (France)
Italiano (Italia)
Polski (Polska)
Português (Brasil)
Türkçe (Türkiye)
Čeština (Česko)
Монгол (Монгол)
Українська (Україна)
中文 (中国)
Login
Structure and topology of RNA in living systems
from
Monday, 30 January 2023 (08:00)
to
Thursday, 2 February 2023 (12:30)
Monday, 30 January 2023
08:30
REGISTRATION
REGISTRATION
08:30 - 09:00
Room: Entrance Rustico (brown building) ECT*
09:00
Introduction
-
Luca Tubiana
Introduction
Luca Tubiana
09:00 - 09:15
Room: Aula Renzo Leonardi
Session I
Session I
09:00 - 10:30
Room: Aula Renzo Leonardi
Luca Tubiana: Introduction Mauricio Comas-Garcia: Selective packaging of HIV-1 genomic RNA
09:15
Selective packaging of HIV-1 genomic RNA
-
Mauricio Comas-Garcia
Selective packaging of HIV-1 genomic RNA
Mauricio Comas-Garcia
09:15 - 10:30
Room: Aula Renzo Leonardi
10:30
Coffee break
Coffee break
10:30 - 11:00
Room: Villa Tambosi
11:00
Session II
Session II
11:00 - 12:30
Room: Aula Renzo Leonardi
Using synthetic biology to unravel RNA tertiary interactions
-
Roee Amit
Using synthetic biology to unravel RNA tertiary interactions
Roee Amit
11:00 - 11:45
Room: Aula Renzo Leonardi
11:45
Computational modeling of icosahedral shell assembly and encapsulation of flexible polymers
-
Michael Hagan
Computational modeling of icosahedral shell assembly and encapsulation of flexible polymers
Michael Hagan
11:45 - 12:30
Room: Aula Renzo Leonardi
12:30
Lunch break
Lunch break
12:30 - 14:30
Room: Villa Tambosi
14:30
Session III
Session III
14:30 - 16:00
Room: Aula Renzo Leonardi
Spiders, entanglements, and RNA structure prediction
-
Marta Szachniuk
Spiders, entanglements, and RNA structure prediction
Marta Szachniuk
14:30 - 15:15
Room: Aula Renzo Leonardi
15:15
Probing the structure and function of long viral RNAs
-
Redmond Smyth
Probing the structure and function of long viral RNAs
Redmond Smyth
15:15 - 16:00
Room: Aula Renzo Leonardi
16:00
Coffee break
Coffee break
16:00 - 16:30
Room: Villa Tambosi
16:30
Molecular Dynamics to investigate Impact of RNA modifications on RNA structural dynamics and recognition
-
Valerio Piomponi
Molecular Dynamics to investigate Impact of RNA modifications on RNA structural dynamics and recognition
Valerio Piomponi
16:30 - 17:00
Room: Aula Renzo Leonardi
Short talks I
Short talks I
16:30 - 17:30
Room: Aula Renzo Leonardi
17:00
WebTetrado, your assistant in the G4 space
-
Michal Zurkowski
WebTetrado, your assistant in the G4 space
Michal Zurkowski
17:00 - 17:30
Room: Aula Renzo Leonardi
Tuesday, 31 January 2023
09:00
Physical models for the degradation resistance of xrRNAs
-
Christian Micheletti
Physical models for the degradation resistance of xrRNAs
Christian Micheletti
09:00 - 09:45
Room: Aula Renzo Leonardi
Session IV
Session IV
09:00 - 10:30
Room: Aula Renzo Leonardi
09:45
RNA as a randomly branched polymer
-
Anže Božič
RNA as a randomly branched polymer
Anže Božič
09:45 - 10:30
Room: Aula Renzo Leonardi
10:30
Coffee break
Coffee break
10:30 - 11:00
Room: Villa Tambosi
11:00
RNA secondary structures in RNA viruses
-
Manja Marz
RNA secondary structures in RNA viruses
Manja Marz
11:00 - 11:45
Room: Aula Renzo Leonardi
Session V
Session V
11:00 - 12:30
Room: Aula Renzo Leonardi
11:45
Dissecting RNA dynamics combining molecular simulations and solution experiments
-
Giovanni Bussi
Dissecting RNA dynamics combining molecular simulations and solution experiments
Giovanni Bussi
11:45 - 12:30
Room: Aula Renzo Leonardi
12:30
Lunch break
Lunch break
12:30 - 14:30
Room: Villa Tambosi
14:30
Conformational space exploration of minimal ribozymes for autocatalytic networks
-
Guillaume Stirnemann
Conformational space exploration of minimal ribozymes for autocatalytic networks
Guillaume Stirnemann
14:30 - 15:15
Room: Aula Renzo Leonardi
Session VI
Session VI
14:30 - 16:00
Room: Aula Renzo Leonardi
15:15
Simulations of RNA structural dynamics and ligand association paths: the case of an aminoglycoside-sensing riboswitch
-
Joanna Trylska
Simulations of RNA structural dynamics and ligand association paths: the case of an aminoglycoside-sensing riboswitch
Joanna Trylska
15:15 - 16:00
Room: Aula Renzo Leonardi
Wednesday, 1 February 2023
09:00
RNA structural ensembles from energy landscape explorations
-
Konstantin Roeder
RNA structural ensembles from energy landscape explorations
Konstantin Roeder
09:00 - 09:45
Room: Aula Renzo Leonardi
Session VII
Session VII
09:00 - 10:30
Room: Aula Renzo Leonardi
09:45
Quantitative electrostatic force tomography for proteinaceous capsids in interaction with an approaching nanoscale substrate
-
Horacio V. Guzman
(
Universidad Autonoma de Madrid | Jozef Stefan Institute
)
Quantitative electrostatic force tomography for proteinaceous capsids in interaction with an approaching nanoscale substrate
Horacio V. Guzman
(
Universidad Autonoma de Madrid | Jozef Stefan Institute
)
09:45 - 10:30
Room: Aula Renzo Leonardi
10:30
Coffee break
Coffee break
10:30 - 11:00
Room: Villa Tambosi
11:00
Integrative modeling strategies and RNA polymorphism
-
Samuela Pasquali
Integrative modeling strategies and RNA polymorphism
Samuela Pasquali
11:00 - 11:45
Room: Aula Renzo Leonardi
Session VIII
Session VIII
11:00 - 12:30
Room: Aula Renzo Leonardi
11:45
RNA Composer-based modeling of RNA 3D structures in CASP15
-
Maciej Antczak
RNA Composer-based modeling of RNA 3D structures in CASP15
Maciej Antczak
11:45 - 12:30
Room: Aula Renzo Leonardi
12:30
Lunch break
Lunch break
12:30 - 14:30
Room: Villa Tambosi
14:30
Differential SHAPE probing to screen computationally designed RNA and to detect pseudoknot and non-canonical interactions
-
Bruno Sargeuil
Differential SHAPE probing to screen computationally designed RNA and to detect pseudoknot and non-canonical interactions
Bruno Sargeuil
14:30 - 15:15
Room: Aula Renzo Leonardi
Session IX
Session IX
14:30 - 16:00
Room: Aula Renzo Leonardi
15:15
Discussion
Discussion
15:15 - 16:00
Room: Aula Renzo Leonardi
16:00
Coffee break
Coffee break
16:00 - 16:30
Room: Villa Tambosi
16:30
Discussion
Discussion
16:30 - 17:30
Room: Aula Renzo Leonardi
Moderators: Samuela Pasquali, Luca Tubiana, Anže Božič
Thursday, 2 February 2023
09:00
Deciphering the mechanism of influenza A genome packaging using genome-wide approaches
-
Roland Marquet
Deciphering the mechanism of influenza A genome packaging using genome-wide approaches
Roland Marquet
09:00 - 09:45
Room: Aula Renzo Leonardi
Session XI
Session XI
09:00 - 10:15
Room: Aula Renzo Leonardi
09:45
Computational 3D structure characterization of CCMV RNA2 fragment
-
Giovanni Mattiotti
Computational 3D structure characterization of CCMV RNA2 fragment
Giovanni Mattiotti
09:45 - 10:15
Room: Aula Renzo Leonardi
10:15
Coffee break
Coffee break
10:15 - 10:45
Room: Villa Tambosi
10:45
Knot or not in RNA?
-
Wanda Niemyska
Knot or not in RNA?
Wanda Niemyska
10:45 - 11:15
Room: Aula Renzo Leonardi
Short talks 2
Short talks 2
10:45 - 11:45
Room: Aula Renzo Leonardi
11:15
RNA Abstractions for Structural Comparison and Classification
-
Michela Quadrini
RNA Abstractions for Structural Comparison and Classification
Michela Quadrini
11:15 - 11:45
Room: Aula Renzo Leonardi